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Other data

Published Data

Information about available data of the types that do not fit into other categories of data on our portal is displayed on this page.

Data available from research groups in Sweden

The list of available data on this Portal was curated manually until February 2022. After February 2022, we instead began to use a script to query the Europe PMC database (making use of their API) in order to locate relevant publications. We only include data from publications about COVID-19/SARS-CoV-2 that BOTH involve at least one author affiliated with a Swedish research institution AND openly share reusable data and/or code. The code used for the query is written in Python and, as with all of our code, it is openly available in GitHub. We welcome others to reuse it and to repurpose it for other pathogens.

The lists of available data may not be exhaustive as the script used to generate it does not search for every possible database/repository. If you find that a dataset is missing, or that the information related to it is incorrect, please get in touch with us

Last updated: 2022-09-23

Publication Available dataset and code
Ambikan A. T., Yang H., Krishnan S., Svensson Akusjärvi S., et al (2022)
Elsevier BV
DOI: 10.1016/j.cels.2022.06.006
Mora C., McKenzie T., Gaw I. M., Dean J. M., et al (2022)
Springer Science and Business Media LLC
DOI: 10.1038/s41558-022-01426-1
Andersson P. A., Tinghög G., Västfjäll D. (2022)
Springer Science and Business Media LLC
DOI: 10.1057/s41599-022-01257-7
Ågren P., Knoph E., Berntsson Svensson R. (2022)
Springer Science and Business Media LLC
DOI: 10.1007/s10664-022-10176-9
Olofsson T., Vilhelmsson A. (2022)
Elsevier BV
DOI: 10.1016/j.dib.2021.107698
Raffetti E., Mondino E., Di Baldassarre G. (2022)
Springer Science and Business Media LLC
DOI: 10.1038/s41598-022-13218-w
Buitrago-Garcia D., Ipekci A. M., Heron L., Imeri H., et al (2022)
Public Library of Science (PLoS)
DOI: 10.1371/journal.pmed.1003987
McCarthy C. V., O’Mara O., van Leeuwen E., Sherratt K., et al (2022)
Springer Science and Business Media LLC
DOI: 10.1186/s12889-022-13219-4
Ledebur K., Kaleta M., Chen J., Lindner S. D., et al (2022)
Public Library of Science (PLoS)
DOI: 10.1371/journal.pcbi.1009973
Sheen J. K., Haushofer J., Metcalf C. J. E., Kennedy‐Shaffer L. (2022)
Wiley
DOI: 10.1002/sim.9365
Elvén M., Kerstis B., Stier J., Hellström C., et al (2022)
MDPI AG
DOI: 10.3390/ijerph19052558
Rück C., Mataix-Cols D., Malki K., Adler M., et al (2022)
BMJ
DOI: 10.1136/bmjopen-2021-049302
Cornillet M., Strunz B., Rooyackers O., Ponzetta A., et al (2021)
Wiley
DOI: 10.1002/eji.202149626
Murray B., Kerfoot E., Chen L., Deng J., et al (2021)
Springer Science and Business Media LLC
DOI: 10.1038/s41597-021-01071-x
Kapiriri L., Kiwanuka S., Biemba G., Velez C., et al (2021)
Oxford University Press (OUP)
DOI: 10.1093/heapol/czab113
Mäkelä P., Rossow I., Moan I. S., Bye E. K., et al (2021)
Wiley
DOI: 10.1002/mpr.1892
Wang K., Goldenberg A., Dorison C. A., Miller J. K., et al (2021)
Springer Science and Business Media LLC
DOI: 10.1038/s41562-021-01173-x
Wang K., Goldenberg A., Dorison C. A., Miller J. K., et al (2021)
Springer Science and Business Media LLC
DOI: 10.1038/s41562-021-01173-x
Hosen I., Pakpour A. H., Sakib N., Hussain N., et al (2021)
Public Library of Science (PLoS)
DOI: 10.1371/journal.pone.0251151
Alrawashdeh H. M., Al-Tammemi A. B., Alzawahreh M. K., Al-Tamimi A., et al (2021)
Springer Science and Business Media LLC
DOI: 10.1186/s12889-021-10897-4
Funk T., Pharris A., Spiteri G., Bundle N., et al (2021)
European Centre for Disease Control and Prevention (ECDC)
DOI: 10.2807/1560-7917.ES.2021.26.16.2100348
Steele J., Androulakis-Korakakis P., Carlson L., Williams D., et al (2021)
Springer Science and Business Media LLC
DOI: 10.1007/s40279-021-01438-5
Böhm S., Woudenberg T., Chen D., Marosevic D. V., et al (2021)
Cambridge University Press (CUP)
DOI: 10.1017/S0950268821000510
Hothorn T., Bopp M., Günthard H., Keiser O., et al (2021)
BMJ
DOI: 10.1136/bmjopen-2020-042387
Papazoglou A., Conen A., Haubitz S., Tschopp M., et al (2021)
MDPI AG
DOI: 10.3390/jcm10050896
Snitz K., Honigstein D., Weissgross R., Ravia A., et al (2021)
Cold Spring Harbor Laboratory
DOI: 10.1101/2021.02.18.21251422
Vlachos J., Hertegård E., B. Svaleryd H. (2021)
Proceedings of the National Academy of Sciences
DOI: 10.1073/pnas.2020834118
Feldman M., Lacey Krylova V., Farrow P., Donovan L., et al (2021)
Public Library of Science (PLoS)
DOI: 10.1371/journal.pone.0244924
Alekseenko A., Barrett D., Pareja-Sanchez Y., Howard R. J., et al (2021)
Springer Science and Business Media LLC
DOI: 10.1038/s41598-020-80352-8
Pettke A., Tampere M., Pronk R., Wallner O., et al (2020)
MDPI AG
DOI: 10.3390/v13010037
Pettke A., Tampere M., Pronk R., Wallner O., et al (2020)
MDPI AG
DOI: 10.3390/v13010037
Nyman E., Lindh M., Lövfors W., Simonsson C., et al (2020)
Wiley
DOI: 10.1002/psp4.12568
Wacker A., Weigand J. E., Akabayov S. R., Altincekic N., et al (2020)
Oxford University Press (OUP)
DOI: 10.1093/nar/gkaa1013
Custódio T. F., Das H., Sheward D. J., Hanke L., et al (2020)
Springer Science and Business Media LLC
DOI: 10.1038/s41467-020-19204-y
Bryant P., Elofsson A. (2020)
Cold Spring Harbor Laboratory
DOI: 10.1101/2020.10.19.20215046
Sekine T., Perez-Potti A., Rivera-Ballesteros O., Strålin K., et al (2020)
Elsevier BV
DOI: 10.1016/j.cell.2020.08.017
Maucourant C., Filipovic I., Ponzetta A., Aleman S., et al (2020)
American Association for the Advancement of Science (AAAS)
DOI: 10.1126/sciimmunol.abd6832
Bryant P., Elofsson A. (2020)
Cold Spring Harbor Laboratory
DOI: 10.1101/2020.07.03.20145649