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Accelerating research through data sharing

We are currently working on extending the scope of the Portal to include pandemic preparedness in general.
Some sections of the Portal have already transitioned whereas others will transition in the near future.

Data highlights

Highlights of recent openly shared data and data re-use. See all highlights

Study of host-viral interactions of Crimean-Congo haemorrhagic fever identified potential new drugs
Study of host-viral interactions of Crimean-Congo haemorrhagic fever identified potential new drugs

2022-05-06

New study gives insight into host-viral interactions of Crimean-Congo hemorrhagic fever, an infectious disease without available treatments. Raw RNAseq, mass spectrometry proteomics data and code shared.

Large scale immunofluorescence to explore the host cell response to SARS-CoV-2 infection
Large scale immunofluorescence to explore the host cell response to SARS-CoV-2 infection

2022-04-25

Expression of 602 host proteins were evaluated in populations of infected and non-infected cells using immunofluorescence. ≈75,000 images have been published as a resource for further studies.

Direct RT-PCR used to monitor Omicron BA.1/BA.2 variant transition in Sweden
Direct RT-PCR used to monitor Omicron BA.1/BA.2 variant transition in Sweden

2022-04-04

Lentini and collegues used direct RT-PCR to show the transition from Omicron BA.1 to sub-variant BA.2 in Sweden Jan-March 2022. New Preprint from Reinius lab which shares data and code.

Sample Collection Database

Registry of Swedish biobanks and sample collections for COVID-19 research. About the database

Biobanks: 18
Collections: 35
Sample Collection Database

Pages with recent data and visualizations on SARS-CoV-2 and COVID-19 tests carried out at various research facilities.

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Stockholm
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Malmö
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Uppsala
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About this portal

The Swedish COVID-19 Data Portal provides information, guidelines, tools and services to support researchers to utilise Swedish and European infrastructures for data sharing. The portal is a national node of the European COVID-19 Data Portal. The portal is operated by the SciLifeLab Data Centre and partners. Suggestions, corrections, and other comments are most welcome.

Partner projects

CRUSH Covid
CRUSH Covid maps outbreaks in Uppsala County by visualizing the number of cases, test positivity, geographic distribution, age distribution, etc. Data on positivity per postal code is available for download and further re-use.
CSSS continuously collects data on COVID-19 prevalence, symptoms, and vaccinations through a smartphone app with over 200,000 users in Sweden. Collected raw data can be requested for use in research projects. Find out more about the project here.